PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14326
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 76aa    MW: 8650.86 Da    PI: 8.2607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14326genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.44.2e-092352056
         AP2 20 rdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                r p++   r+r +l +f+taeeA  a+++a  +l+ge
  PEQU_14326  2 RLPKN---RTRLWLCTFDTAEEASMAYDKAVFRLRGE 35
                55543...49*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.5E-16143IPR001471AP2/ERF domain
PROSITE profilePS5103212.787142IPR001471AP2/ERF domain
CDDcd000188.61E-16144No hitNo description
SMARTSM003804.1E-7148IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-11243IPR016177DNA-binding domain
PfamPF008471.8E-4735IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
IRLPKNRTRL WLCTFDTAEE ASMAYDKAVF RLRGEFARQN FPHLRHIGAG AGLHSSIDTK  60
LEEHTEPAEC IIIRGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006360275.15e-26PREDICTED: ethylene-responsive transcription factor RAP2-13
SwissprotQ8H1E47e-26RAP24_ARATH; Ethylene-responsive transcription factor RAP2-4
TrEMBLA6YT273e-28A6YT27_9ASPA; DRE-binding protein DREB1
STRINGPGSC0003DMT4000220231e-25(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38235203
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.14e-27related to AP2 4